Gene

si:dkey-238d18.5

ID

ZDB-GENE-131121-374

Name

si:dkey-238d18.5

Symbol

si:dkey-238d18.5 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have sialic acid binding activity. Predicted to be involved in cell adhesion. Predicted to localize to plasma membrane. Orthologous to human SIGLEC10 (sialic acid binding Ig like lectin 10); SIGLEC11 (sialic acid binding Ig like lectin 11); and SIGLEC5 (sialic acid binding Ig like lectin 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:dkey-238d18.5 Human Ortholog

No data available

Associated With si:dkey-238d18.5 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013162	CD80-like, immunoglobulin C2-set
Family	IPR051036	Sialic acid-binding Ig-like lectin
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	CD80-like, immunoglobulin C2-set	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Sialic acid-binding Ig-like lectin
UniProtKB:A0A8M3AQ42 InterPro	1111
UniProtKB:E7FGV3 InterPro	601

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-238d18.5-201 (1) Ensembl	Ensembl	2,429 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-238d18.5-202 (1) Ensembl	Ensembl	1,250 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-238d18.5-203 (1) Ensembl	Ensembl	1,437 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-238d18.5-204 (1) Ensembl	Ensembl	5,493 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations